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1

[Lecture Notes in Computer Science] Computational Pathology and Ophthalmic Medical Image Analysis Volume 11039 (First International Workshop, COMPAY 2018, and 5th International Workshop, OMIA 2018, Held in Conjunction with MICCAI 2018, Granada, Spain, September 16 - 20, 2018, Proceedings) || Joint Segmentation and Uncertainty Visualization of Retinal Layers in Optical Coherence Tomography Images Using Bayesian Deep Learning

Stoyanov, Danail, Taylor, Zeike, Ciompi, Francesco, Xu, Yanwu, Martel, Anne, Maier-Hein, Lena, Rajpoot, Nasir, van der Laak, Jeroen, Veta, Mitko, McKenna, Stephen, Snead, David, Trucco, Emanuele, Garv

Year:

2018

Language:

english

File:

PDF, 1009 KB

english, 2018

2

Locality Sensitive Deep Learning for Detection and Classification of Nuclei in Routine Colon Cancer Histology Images

Sirinukunwattana, Korsuk, Raza, Shan, Tsang, Yee-Wah, Snead, David, Cree, Ian, Rajpoot, Nasir

Journal:

IEEE Transactions on Medical Imaging

Year:

2016

Language:

english

File:

PDF, 47.73 MB

english, 2016

3

Fast and accurate tumor segmentation of histology images using persistent homology and deep convolutional features

Qaiser, Talha, Tsang, Yee-Wah, Taniyama, Daiki, Sakamoto, Naoya, Nakane, Kazuaki, Epstein, David, Rajpoot, Nasir

Journal:

Medical Image Analysis

Year:

2019

Language:

english

File:

PDF, 6.25 MB

english, 2019

4

Ameliorative Effect of Active Principle Isolated from Seeds of Eugenia jambolana on Carbohydrate Metabolism in Experimental Diabetes

Sharma, Suman Bala, Rajpoot, Reenu, Nasir, Afreena, Prabhu, Krishna Madhava, Murthy, Pothapragada Suryanarayana

Journal:

Evidence-based Complementary and Alternative Medicine

Year:

2011

Language:

english

File:

PDF, 646 KB

english, 2011

5

A Global Covariance Descriptor for Nuclear Atypia Scoring in Breast Histopathology Images

Khan, Adnan, Sirinukunwattana, Korsuk, Rajpoot, Nasir

Journal:

IEEE Journal of Biomedical and Health Informatics

Year:

2015

Language:

english

File:

PDF, 9.38 MB

english, 2015

6

SPIE Proceedings [SPIE SPIE Medical Imaging - Orlando, Florida, United States (Saturday 21 February 2015)] Medical Imaging 2015: Digital Pathology - Multi-class stain separation using independent component analysis

Gurcan, Metin N., Madabhushi, Anant, Trahearn, Nicholas, Snead, David, Cree, Ian, Rajpoot, Nasir

Year:

2015

Language:

english

File:

PDF, 3.17 MB

english, 2015

7

[Lecture Notes in Computer Science] Computational Pathology and Ophthalmic Medical Image Analysis Volume 11039 (First International Workshop, COMPAY 2018, and 5th International Workshop, OMIA 2018, Held in Conjunction with MICCAI 2018, Granada, Spain, September 16 - 20, 2018, Proceedings) || Large Receptive Field Fully Convolutional Network for Semantic Segmentation of Retinal Vasculature in Fundus Images

Stoyanov, Danail, Taylor, Zeike, Ciompi, Francesco, Xu, Yanwu, Martel, Anne, Maier-Hein, Lena, Rajpoot, Nasir, van der Laak, Jeroen, Veta, Mitko, McKenna, Stephen, Snead, David, Trucco, Emanuele, Garv

Year:

2018

Language:

english

File:

PDF, 1.45 MB

english, 2018

8

BioIMAX: A Web 2.0 approach for easy exploratory and collaborative access to multivariate bioimage data

Christian Loyek, Nasir M Rajpoot, Michael Khan, Tim W Nattkemper

Journal:

BMC Bioinformatics

Year:

2011

Language:

english

File:

PDF, 2.15 MB

english, 2011

9

Special issue on microscopy image analysis for biomedical applications

Stephen J. McKenna, Derek Magee, Nasir M. Rajpoot

Journal:

Machine Vision and Applications

Year:

2012

Language:

english

File:

PDF, 198 KB

english, 2012

10

Spatiotemporal maps of CaMKII in dendritic spines

Shahid Khan, Thomas S. Reese, Nasir Rajpoot, Ayisha Shabbir

Journal:

Journal of Computational Neuroscience

Year:

2012

Language:

english

File:

PDF, 1.23 MB

english, 2012

11

A multiresolution framework for local similarity based image denoising

Nasir Rajpoot, Irfan Butt

Journal:

Pattern Recognition

Year:

2012

Language:

english

File:

PDF, 1.85 MB

english, 2012

12

Quantification of cell infection caused by Listeria monocytogenes invasion

Muhammad Arif, Nasir M. Rajpoot, Tim W. Nattkemper, Ulrike Technow, Trinad Chakraborty, Nicole Fisch, Nickels A. Jensen, Karsten Niehaus

Journal:

Journal of Biotechnology

Year:

2011

Language:

english

File:

PDF, 1.29 MB

english, 2011

13

Toponome imaging system: multiplex biomarkers in oncology

Evans, Robert G., Naidu, Babu, Rajpoot, Nasir M., Epstein, David, Khan, Michael

Journal:

Trends in Molecular Medicine

Year:

2012

Language:

english

File:

PDF, 504 KB

english, 2012

14

The Exponential Modulus Theorem

Journal:

Acta Automatica Sinica (Elsevier)

Year:

2012

Language:

english

File:

PDF, 181 KB

english, 2012

15

[IEEE 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI) - Boston, MA, USA (2009.06.28-2009.07.1)] 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Texture based classification of hyperspectral colon biopsy samples using CLBP

Masood, Khalid, Rajpoot, Nasir

Year:

2009

Language:

english

File:

PDF, 304 KB

english, 2009

16

Cell phenotyping in multi-tag fluorescent bioimages

Khan, Adnan M., Raza, Shan-e-Ahmed, Khan, Michael, Rajpoot, Nasir M.

Journal:

Year:

2014

Language:

english

File:

PDF, 3.45 MB

english, 2014

17

A Nonlinear Mapping Approach to Stain Normalization in Digital Histopathology Images Using Image-Specific Color Deconvolution

Khan, Adnan Mujahid, Rajpoot, Nasir, Treanor, Darren, Magee, Derek

Journal:

IEEE Transactions on Biomedical Engineering

Year:

2014

Language:

english

File:

PDF, 890 KB

english, 2014

18

[IEEE 2007 International Conference on Machine Vision - Isalambad, Pakistan (2007.12.28-2007.12.29)] 2007 International Conference on Machine Vision - Classification of potential nuclei in prostate histology images using shape manifold learning

Muhammad Arif,, Rajpoot, Nasir

Year:

2007

Language:

english

File:

PDF, 964 KB

english, 2007

19

[IEEE 2014 Middle East Conference on Biomedical Engineering (MECBME) - Doha, Qatar (2014.02.17-2014.02.20)] 2nd Middle East Conference on Biomedical Engineering - A novel system for scoring of hormone receptors in breast cancer histopathology slides

Khan, Adnan M., Mohammed, Aisha F., Al-Hajri, Shama A., Shamari, Hajer M. Al, Qidwai, Uvais, Mujeeb, Imaad, Rajpoot, Nasir M.

Year:

2014

Language:

english

File:

PDF, 619 KB

english, 2014

20

[IEEE 2014 36th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC) - Chicago, IL (2014.8.26-2014.8.30)] 2014 36th Annual International Conference of the IEEE Engineering in Medicine and Biology Society - On generating cell exemplars for detection of mitotic cells in breast cancer histopathology images

Aloraidi, Nada A., Sirinukunwattana, Korsuk, Khan, Adnan M., Rajpoot, Nasir M.

Year:

2014

Language:

english

File:

PDF, 656 KB

english, 2014

21

[IEEE 2013 6th International IEEE/EMBS Conference on Neural Engineering (NER) - San Diego, CA, USA (2013.11.6-2013.11.8)] 2013 6th International IEEE/EMBS Conference on Neural Engineering (NER) - A connectivity difference measure for identification of functional neuroimaging markers for epilepsy

Riaz, Atif, Rajpoot, Kashif, Rajpoot, Nasir

Year:

2013

Language:

english

File:

PDF, 596 KB

english, 2013

22

[IEEE 2008 5th IEEE International Symposium on Biomedical Imaging (ISBI 2008) - Paris, France (2008.05.14-2008.05.17)] 2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Flexible synapse detection in fluorescence micrographs by modeling human expert grading

Herold, Julia, Friedenberger, Manuela, Bode, Marcus, Rajpoot, Nasir, Schubert, Walter, Nattkemper, Tim W.

Year:

2008

Language:

english

File:

PDF, 308 KB

english, 2008

23

[IEEE 8th International Multitopic Conference, 2004. Proceedings of INMIC 2004. - Lahore, Pakistan (Dec. 24-26, 2004)] 8th International Multitopic Conference, 2004. Proceedings of INMIC 2004. - Wavelets and support vector machines for texture classification

Kashif Mahmood Rajpoot, Nasir Mahmood Rajpoot

Year:

2004

Language:

english

File:

PDF, 880 KB

english, 2004

24

[IEEE 2013 35th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC) - Osaka (2013.7.3-2013.7.7)] 2013 35th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC) - A novel framework for exploratory analysis of highly variable morphology of migrating epithelial cells

Jefferyes, Samuel D. R., Epstein, David B. A., Straube, Anne, Rajpoot, Nasir M.

Year:

2013

Language:

english

File:

PDF, 2.39 MB

english, 2013

25

[IEEE 2006 International Conference on Image Processing - Atlanta Marriott Marquis, Atlanta, GA, USA (2006.10.8-2006.10.11)] 2006 International Conference on Image Processing - Texture Classification with Ants

Hussain, Arshad, Rajpoot, Nasir, Rajpoot, Kashif

Year:

2006

Language:

english

File:

PDF, 4.27 MB

english, 2006

26

Registration of thermal and visible light images of diseased plants using silhouette extraction in the wavelet domain

Raza, Shan-e-Ahmed, Sanchez, Victor, Prince, Gillian, Clarkson, John P., Rajpoot, Nasir M.

Journal:

Pattern Recognition

Year:

2015

Language:

english

File:

PDF, 7.08 MB

english, 2015

27

Cell words: Modelling the visual appearance of cells in histopathology images

Sirinukunwattana, Korsuk, Khan, Adnan M., Rajpoot, Nasir M.

Journal:

Computerized Medical Imaging and Graphics

Year:

2015

Language:

english

File:

PDF, 4.34 MB

english, 2015

28

Localisation of luminal epithelium edge in digital histopathology images of IHC stained slides of endometrial biopsies

Li, Guannan, Sanchez, Victor, Patel, Gnyaneshwari, Quenby, Siobhan, Rajpoot, Nasir

Journal:

Computerized Medical Imaging and Graphics

Year:

2015

Language:

english

File:

PDF, 4.63 MB

english, 2015

29

SPIE Proceedings [SPIE SPIE Medical Imaging - Orlando, Florida, United States (Saturday 21 February 2015)] Medical Imaging 2015: Digital Pathology - A novel texture descriptor for detection of glandular structures in colon histology images

Gurcan, Metin N., Madabhushi, Anant, Sirinukunwattana, Korsuk, Snead, David R., Rajpoot, Nasir M.

Year:

2015

Language:

english

File:

PDF, 1.96 MB

english, 2015

30

[IEEE 2009 16th IEEE International Conference on Image Processing ICIP 2009 - Cairo, Egypt (2009.11.7-2009.11.10)] 2009 16th IEEE International Conference on Image Processing (ICIP) - Multilateral filtering: A novel framework for generic similarity-based image denoising

Butt, Irfan T., Rajpoot, Nasir M.

Year:

2009

Language:

english

File:

PDF, 166 KB

english, 2009

31

Local isotropic phase symmetry measure for detection of beta cells and lymphocytes

Kuse, Manohar, Kalasannavar, Vinay, Rajpoot, Nasir, Wang, Yi-Fang, Khan, Michael

Journal:

Journal of Pathology Informatics

Year:

2011

Language:

english

File:

PDF, 1.81 MB

english, 2011

32

A Stochastic Polygons Model for Glandular Structures in Colon Histology Images

Sirinukunwattana, Korsuk, Snead, David, Rajpoot, Nasir

Journal:

IEEE Transactions on Medical Imaging

Year:

2015

Language:

english

File:

PDF, 9.25 MB

english, 2015

33

The Effect of Flexible Parsing for Dynamic Dictionary-Based Data Compression

Matias, Yossi, Rajpoot, Nasir, Sahinalp, Cenk

Journal:

Journal of Experimental Algorithmics

Year:

2001

Language:

english

File:

PDF, 355 KB

english, 2001

34

[IEEE 2015 IEEE 12th International Symposium on Biomedical Imaging (ISBI 2015) - Brooklyn, NY, USA (2015.4.16-2015.4.19)] 2015 IEEE 12th International Symposium on Biomedical Imaging (ISBI) - A random polygons model of glandular structures in colon histology images

Sirinukunwattana, Korsuk, Snead, David R.J., Rajpoot, Nasir M.

Year:

2015

Language:

english

File:

PDF, 841 KB

english, 2015

35

[IEEE 2015 IEEE 12th International Symposium on Biomedical Imaging (ISBI 2015) - Brooklyn, NY, USA (2015.4.16-2015.4.19)] 2015 IEEE 12th International Symposium on Biomedical Imaging (ISBI) - A model of the spatial microenvironment of the colonic crypt

Kovacheva, Violeta N., Snead, David, Rajpoot, Nasir M.

Year:

2015

Language:

english

File:

PDF, 2.99 MB

english, 2015

36

[IEEE 2007 IEEE International Conference on Image Processing - San Antonio, TX, USA (2007.09.16-2007.10.19)] 2007 IEEE International Conference on Image Processing - Surface Estimation and Tracking using Sequential MCMC Methods for Video Based Rendering

Bowen, Adam, Mullins, Andrew, Wilson, Roland, Rajpoot, Nasir

Year:

2007

Language:

english

File:

PDF, 282 KB

english, 2007

37

SPIE Proceedings [SPIE SPIE Medical Imaging - Orlando, Florida, United States (Saturday 21 February 2015)] Medical Imaging 2015: Digital Pathology - Anisotropic tubular filtering for automatic detection of acid-fast bacilli in Ziehl-Neelsen stained sputum smear samples

Gurcan, Metin N., Madabhushi, Anant, Raza, Shan-e-Ahmed, Marjan, M. Q., Arif, Muhammad, Butt, Farhana, Sultan, Faisal, Rajpoot, Nasir M.

Year:

2015

Language:

english

File:

PDF, 469 KB

english, 2015

38

SPIE Proceedings [SPIE SPIE Medical Imaging - Orlando, Florida, United States (Saturday 21 February 2015)] Medical Imaging 2015: Digital Pathology - A circumscribing active contour model for delineation of nuclei and membranes of megakaryocytes in bone marrow trephine biopsy images

Gurcan, Metin N., Madabhushi, Anant, Song, Tzu-Hsi, Sanchez, Victor, EIDaly, Hesham, Rajpoot, Nasir M.

Year:

2015

Language:

english

File:

PDF, 328 KB

english, 2015

39

[IEEE 2016 IEEE-EMBS International Conference on Biomedical and Health Informatics (BHI) - Las Vegas, NV, USA (2016.2.24-2016.2.27)] 2016 IEEE-EMBS International Conference on Biomedical and Health Informatics (BHI) - How divided is a cell? Eigenphase nuclei for classification of mitotic phase in cancer histology images

Awan, Ruqayya, Aloraidi, Nada, Qidwai, Uvais, Rajpoot, Nasir

Year:

2016

Language:

english

File:

PDF, 786 KB

english, 2016

40

Robust normalization protocols for multiplexed fluorescence bioimage analysis

Ahmed Raza, Shan E, Langenkämper, Daniel, Sirinukunwattana, Korsuk, Epstein, David, Nattkemper, Tim W., Rajpoot, Nasir M.

Journal:

Year:

2016

Language:

english

File:

PDF, 1.53 MB

english, 2016

41

[IEEE 2007 3DTV Conference - Kos, Greece (2007.05.7-2007.05.9)] 2007 3DTV Conference - Video Based Rendering using Surfaces Patches

Mullins, Andrew, Bowen, Adam, Wilson, Roland, Rajpoot, Nasir

Year:

2007

Language:

english

File:

PDF, 2.44 MB

english, 2007

42

SPIE Proceedings [SPIE SPIE Medical Imaging - San Diego, California, USA (Saturday 15 February 2014)] Medical Imaging 2014: Digital Pathology - A fast method for approximate registration of whole-slide images of serial sections using local curvature

Gurcan, Metin N., Madabhushi, Anant, Trahearn, Nicholas, Epstein, David, Snead, David, Cree, Ian, Rajpoot, Nasir

Year:

2014

Language:

english

File:

PDF, 787 KB

english, 2014

43

SPIE Proceedings [SPIE SPIE Medical Imaging - San Diego, California, USA (Saturday 15 February 2014)] Medical Imaging 2014: Digital Pathology - A Bayesian framework for cell-level protein network analysis for multivariate proteomics image data

Gurcan, Metin N., Madabhushi, Anant, Kovacheva, Violet N., Sirinukunwattana, Korsuk, Rajpoot, Nasir M.

Year:

2014

Language:

english

File:

PDF, 1.41 MB

english, 2014

44

[IEEE 2016 IEEE 13th International Symposium on Biomedical Imaging (ISBI 2016) - Prague, Czech Republic (2016.4.13-2016.4.16)] 2016 IEEE 13th International Symposium on Biomedical Imaging (ISBI) - Stain deconvolution of histology images via independent component analysis in the wavelet domain

Alsubaie, Najah, Raza, Shan E Ahmed, Rajpoot, Nasir

Year:

2016

Language:

english

File:

PDF, 3.31 MB

english, 2016

45

SPIE Proceedings [SPIE Optical Science and Technology, SPIE's 48th Annual Meeting - San Diego, California, USA (Sunday 3 August 2003)] Wavelets: Applications in Signal and Image Processing X - Local discriminant wavelet packet basis for texture classification

Rajpoot, Nasir, Unser, Michael A., Aldroubi, Akram, Laine, Andrew F.

Year:

2003

Language:

english

File:

PDF, 230 KB

english, 2003

46

[IEEE 2016 IEEE 13th International Symposium on Biomedical Imaging (ISBI 2016) - Prague, Czech Republic (2016.4.13-2016.4.16)] 2016 IEEE 13th International Symposium on Biomedical Imaging (ISBI) - Handcrafted features with convolutional neural networks for detection of tumor cells in histology images

Kashif, Muhammad Nasim, Raza, Shan E Ahmed, Sirinukunwattana, Korsuk, Arif, Muhammmad, Rajpoot, Nasir

Year:

2016

Language:

english

File:

PDF, 1.65 MB

english, 2016

47

Validation of digital pathology imaging for primary histopathological diagnosis

Snead, David R J, Tsang, Yee-Wah, Meskiri, Aisha, Kimani, Peter K, Crossman, Richard, Rajpoot, Nasir M, Blessing, Elaine, Chen, Klaus, Gopalakrishnan, Kishore, Matthews, Paul, Momtahan, Navid, Read-Jo

Journal:

Year:

2016

Language:

english

File:

PDF, 141 KB

english, 2016

48

Persistent Homology for Fast Tumor Segmentation in Whole Slide Histology Images

Qaiser, Talha, Sirinukunwattana, Korsuk, Nakane, Kazuaki, Tsang, Yee-Wah, Epstein, David, Rajpoot, Nasir

Journal:

Procedia Computer Science

Year:

2016

Language:

english

File:

PDF, 1.01 MB

english, 2016

49

Using Geodesic Space Density Gradients for Network Community Detection

Mahmood, Arif, Small, Michael, Al-Maadeed, Somaya, Rajpoot, Nasir

Journal:

IEEE Transactions on Knowledge and Data Engineering

Year:

2016

Language:

english

File:

PDF, 4.32 MB

english, 2016

50

Simultaneous automatic scoring and co-registration of hormone receptors in tumor areas in whole slide images of breast cancer tissue slides

Trahearn, Nicholas, Tsang, Yee Wah, Cree, Ian A., Snead, David, Epstein, David, Rajpoot, Nasir

Journal:

Cytometry Part A

Year:

2016

Language:

english

File:

PDF, 795 KB

english, 2016